Skip to content

Pull requests: loculus-project/loculus

New pull request New
209 Open 4,509 Closed
209 Open 4,509 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

feat(backend): send release confirmation emails backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure preview Triggers a deployment to argocd update_db_schema
#6905 opened Jul 10, 2026 by theosanderson-agent Collaborator • Draft
5
feat(website): improve sequence details readability preview Triggers a deployment to argocd website Tasks related to the web application
#6904 opened Jul 10, 2026 by theosanderson Member • Draft
1
chore(deps): bump the minorandpatch group in /keycloak/keycloakify with 8 updates dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6901 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump org.springframework.boot from 3.5.7 to 4.1.0 in /backend dependencies Pull requests that update a dependency file java Pull requests that update Java code
#6900 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump org.jetbrains.exposed:exposed-bom from 0.61.0 to 1.3.1 in /backend dependencies Pull requests that update a dependency file java Pull requests that update Java code
#6898 opened Jul 10, 2026 by dependabot Bot Loading…
1
chore(deps): bump the patch group in /backend with 3 updates dependencies Pull requests that update a dependency file java Pull requests that update Java code
#6897 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump types-pyyaml from 6.0.12.20250915 to 6.0.12.20260518 in /ena-submission conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6895 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump types-psycopg2 from 2.9.21.20251012 to 2.9.21.20260518 in /ena-submission conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6894 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump pytz from 2025.2 to 2026.2 in /ena-submission conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6892 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump types-pytz from 2025.2.0.20250809 to 2026.2.0.20260518 in /ena-submission conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6893 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump the minorandpatch group in /ena-submission with 17 updates conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6891 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps): bump the minorandpatch group in /preprocessing/nextclade with 3 updates conda Pull requests that update conda code dependencies Pull requests that update a dependency file
#6890 opened Jul 10, 2026 by dependabot Bot Loading…
chore(deps-dev): bump prettier from 3.9.4 to 3.9.5 in /integration-tests in the minorandpatch group dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6888 opened Jul 10, 2026 by dependabot Bot Loading…
fix(backend): Validate file group ownership on submit-edited-data backend related to the loculus backend component
#6885 opened Jul 10, 2026 by tombch Collaborator Loading…
3 tasks
1
1
feat(deposition): update bioprojects using unique project_id key deposition related to ENA/INSDC deposition
#6884 opened Jul 10, 2026 by anna-parker Contributor Loading…
1
feat(deposition): improve ena test logs deposition related to ENA/INSDC deposition preview Triggers a deployment to argocd
#6881 opened Jul 10, 2026 by anna-parker Contributor Loading…
1 task done
1
feat(deposition): stop checking for GCAs on NCBI deposition related to ENA/INSDC deposition
#6878 opened Jul 10, 2026 by anna-parker Contributor Loading…
1
feat(prepro): Add deacon preview Triggers a deployment to argocd
#6876 opened Jul 9, 2026 by maverbiest Contributor • Draft
3 tasks
feat(deposition): no longer special case broker for manifest creation deposition related to ENA/INSDC deposition
#6874 opened Jul 9, 2026 by anna-parker Contributor Loading…
3 tasks
3
chore(deps): bump astro from 6.4.8 to 7.0.7 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6869 opened Jul 8, 2026 by dependabot Bot Loading…
chore(deps-dev): bump @vitejs/plugin-react from 5.2.0 to 6.0.3 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6868 opened Jul 8, 2026 by dependabot Bot Loading…
chore(deps): bump typescript from 6.0.3 to 7.0.2 in /docs dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6863 opened Jul 8, 2026 by dependabot Bot Loading…
fix(website): Disable submit button for submission/revision/edit during file uploads website Tasks related to the web application
#6855 opened Jul 7, 2026 by tombch Collaborator • Draft
3 tasks
1
feat(backend, config): configure S3 to use IAM roles backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure
#6846 opened Jul 6, 2026 by anna-parker Contributor • Draft
2
feat(website,backend): notification bell for sequences awaiting review [WIP] backend related to the loculus backend component preview Triggers a deployment to argocd update_db_schema website Tasks related to the web application
#6841 opened Jul 5, 2026 by corneliusroemer Contributor • Draft
1
1
ProTip! Filter pull requests by the default branch with base:main.