A comprehensive bioinformatics pipeline for downloading and analyzing genes associated with specific phenotypes from multiple biological databases. This package provides both R scripts for gene retrieval and Python analysis tools for downstream analysis.

Protein-network proximity analysis for Parkinson's disease candidate prioritization using STRING and GTEx substantia nigra expression.

Extract, cluster and analyse gene expression patterns using GTEx data and STRING-db and Enrichr APIs

A GNN-based platform for predicting novel drug-target interactions to accelerate R&D.

虚拟小鼠 vmouse · IGFBP4 基因扰动数据包:LINCS/DepMap/IMPC/STRING 等真实公开数据检索+富集(非预测)

AI-powered drug repurposing pipeline that federates live data across 8 biomedical databases in real time, ranks candidates via DeepSeek V4 LLM analysis, and visualizes target–drug–protein networks in an interactive 3D knowledge graph.

End‑to‑end pipeline for generating context‑aware drug embeddings from LINCS L1000 using RNA‑seq preprocessing, STRING PPI networks, and GNNs, with UMAP visualisation and drug‑class neighbourhood analysis.

STRING protein-protein interaction networks across ~12k organisms

Analyze Parkinson’s disease candidate genes with protein-network proximity using STRING and GTEx substantia nigra data for prioritization